Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Gm38910-201ENSMUST00000204630 2448 ntBASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 AC154171.3-201ENSMUST00000224519 2505 ntBASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gtf3c6Q9D8P7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm27046-201ENSMUST00000182160 463 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm38266-201ENSMUST00000194931 421 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gtf3c6Q9D8P7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Gm45598-202ENSMUST00000210719 986 ntBASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gtf3c6Q9D8P7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms