Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm21362-201ENSMUST00000194272 928 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm32111-201ENSMUST00000207689 846 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Lect2-202ENSMUST00000225183 823 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gtf2a1Q99PM3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Zfp672-202ENSMUST00000064786 2765 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 AC154171.3-201ENSMUST00000224519 2505 ntBASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Gm42693-201ENSMUST00000196779 631 ntBASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gtf2a1Q99PM3 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gtf2a1Q99PM3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms