Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm13296-201ENSMUST00000117854 997 ntBASIC11.46□□□□□ -0.57
Hnf4aP49698 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm38317-201ENSMUST00000195564 343 ntBASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm19287-201ENSMUST00000203190 358 ntBASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm43962-201ENSMUST00000203898 190 ntBASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm7783-201ENSMUST00000204795 781 ntBASIC11.46□□□□□ -0.57
Hnf4aP49698 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hnf4aP49698 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Hnf4aP49698 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.46□□□□□ -0.58
Hnf4aP49698 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hnf4aP49698 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.45□□□□□ -0.58
Hnf4aP49698 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hnf4aP49698 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Gm13350-201ENSMUST00000120519 479 ntBASIC11.45□□□□□ -0.58
Hnf4aP49698 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.45□□□□□ -0.58
Hnf4aP49698 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hnf4aP49698 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.45□□□□□ -0.58
Hnf4aP49698 AA914427-201ENSMUST00000193194 1166 ntBASIC11.45□□□□□ -0.58
Hnf4aP49698 Gm43438-201ENSMUST00000198133 379 ntBASIC11.45□□□□□ -0.58
Hnf4aP49698 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.45□□□□□ -0.58
Hnf4aP49698 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Hnf4aP49698 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.45□□□□□ -0.58
Hnf4aP49698 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.45□□□□□ -0.58
Hnf4aP49698 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.45□□□□□ -0.58
Hnf4aP49698 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.45□□□□□ -0.58
Hnf4aP49698 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hnf4aP49698 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hnf4aP49698 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.44□□□□□ -0.58
Hnf4aP49698 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.44□□□□□ -0.58
Hnf4aP49698 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hnf4aP49698 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.44□□□□□ -0.58
Hnf4aP49698 Gm22323-201ENSMUST00000103832 109 ntBASIC11.44□□□□□ -0.58
Hnf4aP49698 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.44□□□□□ -0.58
Hnf4aP49698 Gm13665-201ENSMUST00000120830 528 ntBASIC11.44□□□□□ -0.58
Hnf4aP49698 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hnf4aP49698 Gm17376-201ENSMUST00000166016 84 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms