Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.35□□□□□ -0.59
Cdh4P39038 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh4P39038 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh4P39038 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Cdh4P39038 Gm23596-201ENSMUST00000104304 132 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Gm4909-201ENSMUST00000118749 794 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Gm12217-201ENSMUST00000118858 696 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Gm15004-201ENSMUST00000119192 630 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh4P39038 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh4P39038 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Rps4l-202ENSMUST00000204242 789 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh4P39038 Gm2553-201ENSMUST00000215986 605 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.34□□□□□ -0.59
Cdh4P39038 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh4P39038 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdh4P39038 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.34□□□□□ -0.59
Cdh4P39038 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh4P39038 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.59
Cdh4P39038 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.33□□□□□ -0.59
Cdh4P39038 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cdh4P39038 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.33□□□□□ -0.59
Cdh4P39038 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh4P39038 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.33□□□□□ -0.6
Cdh4P39038 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdh4P39038 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdh4P39038 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh4P39038 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.33□□□□□ -0.6
Cdh4P39038 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh4P39038 Gm16570-201ENSMUST00000161951 436 ntBASIC11.33□□□□□ -0.6
Cdh4P39038 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdh4P39038 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Gm27552-201ENSMUST00000183351 62 ntBASIC11.33□□□□□ -0.6
Cdh4P39038 Gm27844-201ENSMUST00000183613 62 ntBASIC11.33□□□□□ -0.6
Cdh4P39038 Gm3332-201ENSMUST00000189337 928 ntBASIC11.33□□□□□ -0.6
Cdh4P39038 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh4P39038 Gm37466-201ENSMUST00000195692 652 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms