Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.88□□□□□ -0.51
RxrbP28704 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RxrbP28704 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RxrbP28704 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RxrbP28704 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RxrbP28704 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RxrbP28704 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RxrbP28704 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
RxrbP28704 Mir1247-201ENSMUST00000116706 82 ntBASIC11.87□□□□□ -0.51
RxrbP28704 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
RxrbP28704 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Gm8602-201ENSMUST00000184045 607 ntBASIC11.87□□□□□ -0.51
RxrbP28704 Gm45784-201ENSMUST00000188360 142 ntBASIC11.87□□□□□ -0.51
RxrbP28704 Gm6266-201ENSMUST00000203844 806 ntBASIC11.87□□□□□ -0.51
RxrbP28704 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RxrbP28704 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
RxrbP28704 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RxrbP28704 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.87□□□□□ -0.51
RxrbP28704 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.87□□□□□ -0.51
RxrbP28704 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.87□□□□□ -0.51
RxrbP28704 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RxrbP28704 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RxrbP28704 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.86□□□□□ -0.51
RxrbP28704 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Gm10434-201ENSMUST00000101158 471 ntBASIC11.86□□□□□ -0.51
RxrbP28704 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Gm15610-201ENSMUST00000120584 195 ntBASIC11.86□□□□□ -0.51
RxrbP28704 Gm11960-201ENSMUST00000122068 925 ntBASIC11.86□□□□□ -0.51
RxrbP28704 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
RxrbP28704 Gm6222-202ENSMUST00000182143 629 ntBASIC11.86□□□□□ -0.51
RxrbP28704 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.86□□□□□ -0.51
RxrbP28704 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.86□□□□□ -0.51
RxrbP28704 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RxrbP28704 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RxrbP28704 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RxrbP28704 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RxrbP28704 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RxrbP28704 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RxrbP28704 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
RxrbP28704 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
RxrbP28704 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RxrbP28704 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
RxrbP28704 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms