Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFRAP16234 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFRAP16234 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFRAP16234 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFRAP16234 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFRAP16234 AC003102.2-201ENST00000589195 1469 ntBASIC15.71■□□□□ 0.1
PDGFRAP16234 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.71■□□□□ 0.1
PDGFRAP16234 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
PDGFRAP16234 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFRAP16234 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFRAP16234 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.71■□□□□ 0.1
PDGFRAP16234 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFRAP16234 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 ANKRD19P-201ENST00000338192 862 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PDGFRAP16234 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 BOLA2P3-201ENST00000404566 256 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 POM121L8P-201ENST00000417732 1281 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 TLE1P1-201ENST00000422965 589 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFRAP16234 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFRAP16234 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 POM121L9P-203ENST00000441984 1285 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.7■□□□□ 0.1
PDGFRAP16234 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.7■□□□□ 0.1
PDGFRAP16234 FTH1P14-201ENST00000482930 551 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFRAP16234 AC025279.2-201ENST00000569730 653 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 AL359881.2-201ENST00000602973 570 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 MIR6805-201ENST00000615055 62 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 AC132938.4-201ENST00000623835 848 ntBASIC15.7■□□□□ 0.1
PDGFRAP16234 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PDGFRAP16234 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFRAP16234 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFRAP16234 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFRAP16234 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
PDGFRAP16234 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
PDGFRAP16234 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFRAP16234 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFRAP16234 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDGFRAP16234 CLUHP2-201ENST00000426660 1303 ntBASIC15.69■□□□□ 0.1
PDGFRAP16234 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PDGFRAP16234 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.69■□□□□ 0.1
PDGFRAP16234 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFRAP16234 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PDGFRAP16234 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDGFRAP16234 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 TPM3P8-201ENST00000330554 643 ntBASIC15.69■□□□□ 0.1
PDGFRAP16234 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.69■□□□□ 0.1
PDGFRAP16234 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PDGFRAP16234 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDGFRAP16234 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.69■□□□□ 0.1
PDGFRAP16234 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.69■□□□□ 0.1
PDGFRAP16234 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFRAP16234 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDGFRAP16234 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFRAP16234 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms