Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.81□□□□□ -0.04
COL6A2P12110 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 AC016397.2-201ENST00000624848 1985 ntBASIC14.81□□□□□ -0.04
COL6A2P12110 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.81□□□□□ -0.04
COL6A2P12110 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
COL6A2P12110 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
COL6A2P12110 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.81□□□□□ -0.04
COL6A2P12110 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
COL6A2P12110 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.81□□□□□ -0.04
COL6A2P12110 MST1P2-201ENST00000457982 2291 ntBASIC14.81□□□□□ -0.04
COL6A2P12110 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
COL6A2P12110 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL6A2P12110 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
COL6A2P12110 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.8□□□□□ -0.04
COL6A2P12110 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 MYADML-201ENST00000474610 2147 ntBASIC14.8□□□□□ -0.04
COL6A2P12110 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 AC026434.2-201ENST00000506094 1078 ntBASIC14.8□□□□□ -0.04
COL6A2P12110 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.8□□□□□ -0.04
COL6A2P12110 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.8□□□□□ -0.04
COL6A2P12110 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.8□□□□□ -0.04
COL6A2P12110 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
COL6A2P12110 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 TCAM1P-207ENST00000485295 1537 ntBASIC14.8□□□□□ -0.04
COL6A2P12110 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
COL6A2P12110 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 SALL4P5-201ENST00000419001 1760 ntBASIC14.8□□□□□ -0.04
COL6A2P12110 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL6A2P12110 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.8□□□□□ -0.04
COL6A2P12110 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
COL6A2P12110 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.79□□□□□ -0.04
COL6A2P12110 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
COL6A2P12110 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.79□□□□□ -0.04
COL6A2P12110 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 AL442647.2-201ENST00000429864 857 ntBASIC14.79□□□□□ -0.04
COL6A2P12110 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL6A2P12110 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.79□□□□□ -0.04
COL6A2P12110 AL512638.1-201ENST00000457493 794 ntBASIC14.79□□□□□ -0.04
COL6A2P12110 KRT8P35-201ENST00000483942 1338 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms