Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P04213 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.3□□□□□ -0.6
P04213 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
P04213 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P04213 Gm15276-201ENSMUST00000145953 498 ntBASIC11.3□□□□□ -0.6
P04213 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Gm20482-202ENSMUST00000174729 825 ntBASIC11.3□□□□□ -0.6
P04213 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
P04213 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Gm43179-201ENSMUST00000198797 275 ntBASIC11.3□□□□□ -0.6
P04213 Gm45331-201ENSMUST00000209868 554 ntBASIC11.3□□□□□ -0.6
P04213 Gm13097-201ENSMUST00000210722 397 ntBASIC11.3□□□□□ -0.6
P04213 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.3□□□□□ -0.6
P04213 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.3□□□□□ -0.6
P04213 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.3□□□□□ -0.6
P04213 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.3□□□□□ -0.6
P04213 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P04213 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
P04213 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.3□□□□□ -0.6
P04213 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P04213 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
P04213 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.3□□□□□ -0.6
P04213 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04213 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.29□□□□□ -0.6
P04213 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.29□□□□□ -0.6
P04213 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.29□□□□□ -0.6
P04213 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04213 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04213 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Gm11509-201ENSMUST00000117358 325 ntBASIC11.29□□□□□ -0.6
P04213 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.29□□□□□ -0.6
P04213 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.29□□□□□ -0.6
P04213 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.29□□□□□ -0.6
P04213 Gm10254-201ENSMUST00000052888 867 ntBASIC11.29□□□□□ -0.6
P04213 Gm5705-201ENSMUST00000066241 711 ntBASIC11.29□□□□□ -0.6
P04213 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.29□□□□□ -0.6
P04213 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.29□□□□□ -0.6
P04213 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.29□□□□□ -0.6
P04213 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
P04213 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04213 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P04213 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P04213 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
P04213 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.28□□□□□ -0.6
P04213 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.28□□□□□ -0.6
P04213 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04213 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.28□□□□□ -0.6
P04213 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms