Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm5070-201ENSMUST00000177599 862 ntBASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm18753-201ENSMUST00000201000 566 ntBASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm19208-201ENSMUST00000213861 912 ntBASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tubb3Q9ERD7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.77□□□□□ -0.52
Tubb3Q9ERD7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tubb3Q9ERD7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tubb3Q9ERD7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tubb3Q9ERD7 BC043934-202ENSMUST00000185694 2356 ntBASIC11.77□□□□□ -0.52
Tubb3Q9ERD7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Tubb3Q9ERD7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Gm6963-201ENSMUST00000147879 379 ntBASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Gm45598-202ENSMUST00000210719 986 ntBASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tubb3Q9ERD7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tubb3Q9ERD7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms