Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.44□□□□□ -0.42
Cntn3Q07409 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cntn3Q07409 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm15004-201ENSMUST00000119192 630 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm13408-201ENSMUST00000119822 798 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm8199-201ENSMUST00000121323 823 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm12176-201ENSMUST00000121420 875 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm13935-201ENSMUST00000121859 798 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm9211-201ENSMUST00000182882 975 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm37246-201ENSMUST00000192665 835 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.43□□□□□ -0.42
Cntn3Q07409 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm6905-201ENSMUST00000205729 511 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm17931-201ENSMUST00000208132 634 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cntn3Q07409 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cntn3Q07409 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.43□□□□□ -0.42
Cntn3Q07409 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cntn3Q07409 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.42□□□□□ -0.42
Cntn3Q07409 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Cntn3Q07409 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cntn3Q07409 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
Cntn3Q07409 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Cntn3Q07409 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Gm11663-201ENSMUST00000117888 290 ntBASIC12.42□□□□□ -0.42
Cntn3Q07409 Gm22334-201ENSMUST00000158070 133 ntBASIC12.42□□□□□ -0.42
Cntn3Q07409 Mir1943-201ENSMUST00000158276 73 ntBASIC12.42□□□□□ -0.42
Cntn3Q07409 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.42□□□□□ -0.42
Cntn3Q07409 Mir3547-201ENSMUST00000175461 88 ntBASIC12.42□□□□□ -0.42
Cntn3Q07409 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cntn3Q07409 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.42□□□□□ -0.42
Cntn3Q07409 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.42□□□□□ -0.42
Cntn3Q07409 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.42□□□□□ -0.42
Cntn3Q07409 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.42□□□□□ -0.42
Cntn3Q07409 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cntn3Q07409 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms