Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.38□□□□□ -0.75
Upk2P38575 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Upk2P38575 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Upk2P38575 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.37□□□□□ -0.75
Upk2P38575 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Upk2P38575 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.37□□□□□ -0.75
Upk2P38575 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Gm43184-201ENSMUST00000197247 542 ntBASIC10.37□□□□□ -0.75
Upk2P38575 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.37□□□□□ -0.75
Upk2P38575 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.37□□□□□ -0.75
Upk2P38575 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.37□□□□□ -0.75
Upk2P38575 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Upk2P38575 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.37□□□□□ -0.75
Upk2P38575 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.37□□□□□ -0.75
Upk2P38575 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Upk2P38575 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Upk2P38575 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Upk2P38575 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Gm14130-201ENSMUST00000118417 987 ntBASIC10.36□□□□□ -0.75
Upk2P38575 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Upk2P38575 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Upk2P38575 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Gm6450-201ENSMUST00000200896 574 ntBASIC10.36□□□□□ -0.75
Upk2P38575 Gm45433-201ENSMUST00000209386 247 ntBASIC10.36□□□□□ -0.75
Upk2P38575 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Upk2P38575 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Upk2P38575 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Upk2P38575 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Upk2P38575 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms