Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 AC115891.3-201ENSMUST00000219161 2472 ntBASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Gm7103-201ENSMUST00000195642 1852 ntBASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc9Q8VC31 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm15953-201ENSMUST00000117656 1732 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm5354-201ENSMUST00000182417 973 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm7730-201ENSMUST00000212486 454 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Gm11735-201ENSMUST00000106377 1581 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc9Q8VC31 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms