Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Gm27627-201ENSMUST00000183644 150 ntBASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Vps53Q8CCB4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps53Q8CCB4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps53Q8CCB4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms