Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AC242376.1-201ENST00000559033 726 ntBASIC15.52■□□□□ 0.08
TPGS2Q68CL5 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TPGS2Q68CL5 AL157813.1-201ENST00000612996 587 ntBASIC15.52■□□□□ 0.08
TPGS2Q68CL5 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.52■□□□□ 0.08
TPGS2Q68CL5 AC006453.1-201ENST00000636037 1257 ntBASIC15.52■□□□□ 0.08
TPGS2Q68CL5 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
TPGS2Q68CL5 AC013726.1-201ENST00000563747 2285 ntBASIC15.52■□□□□ 0.07
TPGS2Q68CL5 CYP4F23P-201ENST00000593402 1579 ntBASIC15.52■□□□□ 0.07
TPGS2Q68CL5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.52■□□□□ 0.07
TPGS2Q68CL5 CICP6-201ENST00000457191 2729 ntBASIC15.52■□□□□ 0.07
TPGS2Q68CL5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 HINT2P1-201ENST00000419438 481 ntBASIC15.51■□□□□ 0.07
TPGS2Q68CL5 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 XBP1P1-201ENST00000436573 652 ntBASIC15.51■□□□□ 0.07
TPGS2Q68CL5 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 FTLP1-201ENST00000449155 526 ntBASIC15.51■□□□□ 0.07
TPGS2Q68CL5 TMEM198B-204ENST00000484016 896 ntBASIC15.51■□□□□ 0.07
TPGS2Q68CL5 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 MIR4754-201ENST00000582477 89 ntBASIC15.51■□□□□ 0.07
TPGS2Q68CL5 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 AL133499.1-201ENST00000596207 608 ntBASIC15.51■□□□□ 0.07
TPGS2Q68CL5 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPGS2Q68CL5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 TMBIM7P-202ENST00000641474 1516 ntBASIC15.5■□□□□ 0.07
TPGS2Q68CL5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.5■□□□□ 0.07
TPGS2Q68CL5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 EEF1DP6-201ENST00000449232 372 ntBASIC15.5■□□□□ 0.07
TPGS2Q68CL5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 RTN3P1-201ENST00000536295 711 ntBASIC15.5■□□□□ 0.07
TPGS2Q68CL5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TPGS2Q68CL5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms