Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO4P61968 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO4P61968 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO4P61968 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO4P61968 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO4P61968 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
LMO4P61968 RBM8B-201ENST00000555532 525 ntBASIC12.18□□□□□ -0.46
LMO4P61968 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.18□□□□□ -0.46
LMO4P61968 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO4P61968 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 RN7SL190P-201ENST00000582519 257 ntBASIC12.18□□□□□ -0.46
LMO4P61968 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO4P61968 AL133499.1-201ENST00000596207 608 ntBASIC12.18□□□□□ -0.46
LMO4P61968 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 AC133540.1-201ENST00000620845 1019 ntBASIC12.18□□□□□ -0.46
LMO4P61968 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
LMO4P61968 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LMO4P61968 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO4P61968 AC068587.6-202ENST00000641839 5619 ntBASIC12.18□□□□□ -0.46
LMO4P61968 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LMO4P61968 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO4P61968 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO4P61968 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
LMO4P61968 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO4P61968 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 AC013268.4-201ENST00000637413 2228 ntBASIC12.17□□□□□ -0.46
LMO4P61968 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 KRT8P21-201ENST00000430398 1491 ntBASIC12.17□□□□□ -0.46
LMO4P61968 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 AC091046.1-201ENST00000331871 207 ntBASIC12.17□□□□□ -0.46
LMO4P61968 AC239868.1-201ENST00000369385 493 ntBASIC12.17□□□□□ -0.46
LMO4P61968 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 MAGEA5-201ENST00000446757 942 ntBASIC12.17□□□□□ -0.46
LMO4P61968 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO4P61968 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO4P61968 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO4P61968 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO4P61968 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 AL157813.1-201ENST00000612996 587 ntBASIC12.17□□□□□ -0.46
LMO4P61968 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 AC006486.2-201ENST00000624246 2199 ntBASIC12.17□□□□□ -0.46
LMO4P61968 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO4P61968 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LMO4P61968 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO4P61968 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms