Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.69□□□□□ -0.54
Hoxa4P06798 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa4P06798 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa4P06798 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Gm13916-201ENSMUST00000117368 628 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 Gm12566-201ENSMUST00000121479 359 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Gm9540-201ENSMUST00000188230 478 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Gm18065-201ENSMUST00000221395 526 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hoxa4P06798 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.68□□□□□ -0.54
Hoxa4P06798 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hoxa4P06798 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa4P06798 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm13045-201ENSMUST00000119019 712 ntBASIC11.67□□□□□ -0.54
Hoxa4P06798 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.67□□□□□ -0.54
Hoxa4P06798 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm29499-201ENSMUST00000189151 486 ntBASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm28329-201ENSMUST00000191208 689 ntBASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm29171-201ENSMUST00000191397 486 ntBASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.67□□□□□ -0.54
Hoxa4P06798 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxa4P06798 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.67□□□□□ -0.54
Hoxa4P06798 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.67□□□□□ -0.54
Hoxa4P06798 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hoxa4P06798 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms