Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RTN3O95197 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.84■□□□□ 0.13
RTN3O95197 MIR1908-201ENST00000410394 80 ntBASIC15.84■□□□□ 0.13
RTN3O95197 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.84■□□□□ 0.13
RTN3O95197 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 RPL13AP20-201ENST00000459725 609 ntBASIC15.84■□□□□ 0.13
RTN3O95197 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.84■□□□□ 0.13
RTN3O95197 AC106820.3-201ENST00000561653 397 ntBASIC15.84■□□□□ 0.13
RTN3O95197 RN7SL713P-201ENST00000582127 302 ntBASIC15.84■□□□□ 0.13
RTN3O95197 RN7SL219P-201ENST00000582872 296 ntBASIC15.84■□□□□ 0.13
RTN3O95197 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 AC004466.1-201ENST00000599515 1080 ntBASIC15.84■□□□□ 0.13
RTN3O95197 OR10B1P-201ENST00000601666 907 ntBASIC15.84■□□□□ 0.13
RTN3O95197 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RTN3O95197 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RTN3O95197 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.84■□□□□ 0.13
RTN3O95197 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RTN3O95197 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RTN3O95197 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RTN3O95197 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RTN3O95197 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.83■□□□□ 0.13
RTN3O95197 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RTN3O95197 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTN3O95197 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 AC007292.2-201ENST00000593524 1812 ntBASIC15.83■□□□□ 0.12
RTN3O95197 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.83■□□□□ 0.12
RTN3O95197 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 Z93015.1-201ENST00000451718 390 ntBASIC15.83■□□□□ 0.12
RTN3O95197 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.83■□□□□ 0.12
RTN3O95197 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 AL391280.1-201ENST00000506969 1062 ntBASIC15.83■□□□□ 0.12
RTN3O95197 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.83■□□□□ 0.12
RTN3O95197 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.83■□□□□ 0.12
RTN3O95197 EEF1DP1-201ENST00000585891 896 ntBASIC15.83■□□□□ 0.12
RTN3O95197 ZACNP1-201ENST00000612259 710 ntBASIC15.83■□□□□ 0.12
RTN3O95197 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.83■□□□□ 0.12
RTN3O95197 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.83■□□□□ 0.12
RTN3O95197 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.83■□□□□ 0.12
RTN3O95197 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTN3O95197 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.83■□□□□ 0.12
RTN3O95197 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN3O95197 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.83■□□□□ 0.12
RTN3O95197 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTN3O95197 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.82■□□□□ 0.12
RTN3O95197 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RTN3O95197 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTN3O95197 FAM86MP-201ENST00000340703 885 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms