Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GPR53P-205ENST00000457298 1084 ntBASIC14.07□□□□□ -0.16
TRIM3O75382 AC093433.1-201ENST00000458048 571 ntBASIC14.07□□□□□ -0.16
TRIM3O75382 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIM3O75382 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRIM3O75382 KRT17P8-201ENST00000540749 863 ntBASIC14.07□□□□□ -0.16
TRIM3O75382 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIM3O75382 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.07□□□□□ -0.16
TRIM3O75382 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 AC233724.13-201ENST00000598383 410 ntBASIC14.07□□□□□ -0.16
TRIM3O75382 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM3O75382 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRIM3O75382 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM3O75382 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 AL122018.1-201ENST00000446607 2310 ntBASIC14.06□□□□□ -0.16
TRIM3O75382 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 ARSEP1-201ENST00000420443 635 ntBASIC14.06□□□□□ -0.16
TRIM3O75382 AC112492.5-201ENST00000421897 457 ntBASIC14.06□□□□□ -0.16
TRIM3O75382 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM3O75382 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM3O75382 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM3O75382 AP001582.1-201ENST00000525856 295 ntBASIC14.06□□□□□ -0.16
TRIM3O75382 AC068587.3-201ENST00000526613 355 ntBASIC14.06□□□□□ -0.16
TRIM3O75382 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM3O75382 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.06□□□□□ -0.16
TRIM3O75382 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 AC148477.4-201ENST00000613430 1793 ntBASIC14.06□□□□□ -0.16
TRIM3O75382 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM3O75382 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM3O75382 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM3O75382 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM3O75382 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRIM3O75382 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM3O75382 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms