Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
MSI1O43347 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MSI1O43347 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
MSI1O43347 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 LINC01101-201ENST00000622953 1884 ntBASIC15.54■□□□□ 0.08
MSI1O43347 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.54■□□□□ 0.08
MSI1O43347 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 FAM86MP-201ENST00000340703 885 ntBASIC15.54■□□□□ 0.08
MSI1O43347 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 MIR326-201ENST00000362220 95 ntBASIC15.54■□□□□ 0.08
MSI1O43347 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.54■□□□□ 0.08
MSI1O43347 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.54■□□□□ 0.08
MSI1O43347 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 Z93015.1-201ENST00000451718 390 ntBASIC15.54■□□□□ 0.08
MSI1O43347 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 AC092658.1-201ENST00000505836 891 ntBASIC15.54■□□□□ 0.08
MSI1O43347 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.54■□□□□ 0.08
MSI1O43347 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.54■□□□□ 0.08
MSI1O43347 EEF1DP1-201ENST00000585891 896 ntBASIC15.54■□□□□ 0.08
MSI1O43347 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.54■□□□□ 0.08
MSI1O43347 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 ZACNP1-201ENST00000612259 710 ntBASIC15.54■□□□□ 0.08
MSI1O43347 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MSI1O43347 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.54■□□□□ 0.08
MSI1O43347 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
MSI1O43347 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.54■□□□□ 0.08
MSI1O43347 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MSI1O43347 BRWD1P1-201ENST00000401091 371 ntBASIC15.53■□□□□ 0.08
MSI1O43347 AL136309.1-201ENST00000403917 691 ntBASIC15.53■□□□□ 0.08
MSI1O43347 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 GOLGA2P4-201ENST00000441462 777 ntBASIC15.53■□□□□ 0.08
MSI1O43347 CHMP1AP1-201ENST00000445563 662 ntBASIC15.53■□□□□ 0.08
MSI1O43347 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
MSI1O43347 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.53■□□□□ 0.08
MSI1O43347 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.53■□□□□ 0.08
MSI1O43347 AC013726.1-201ENST00000563747 2285 ntBASIC15.53■□□□□ 0.08
MSI1O43347 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MSI1O43347 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms