Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Hmg20aQ9DC33 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmg20aQ9DC33 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmg20aQ9DC33 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmg20aQ9DC33 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmg20aQ9DC33 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hmg20aQ9DC33 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hmg20aQ9DC33 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Mir7654-201ENSMUST00000185082 70 ntBASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm37917-201ENSMUST00000194711 392 ntBASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Gm24136-201ENSMUST00000083374 165 ntBASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmg20aQ9DC33 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Gm5687-201ENSMUST00000118252 640 ntBASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Gm18624-201ENSMUST00000220966 658 ntBASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmg20aQ9DC33 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms