Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Gm6007-201ENSMUST00000208170 823 ntBASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3a3Q9D554 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Gm18304-201ENSMUST00000189162 546 ntBASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Gm37922-201ENSMUST00000195596 455 ntBASIC11.96□□□□□ -0.49
Sf3a3Q9D554 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sf3a3Q9D554 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3a3Q9D554 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm8810-201ENSMUST00000172895 754 ntBASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm24526-201ENSMUST00000082921 158 ntBASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.95□□□□□ -0.5
Sf3a3Q9D554 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms