Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.83□□□□□ -0.68
Lims1Q99JW4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Gm38266-201ENSMUST00000194931 421 ntBASIC10.83□□□□□ -0.68
Lims1Q99JW4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.83□□□□□ -0.68
Lims1Q99JW4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.83□□□□□ -0.68
Lims1Q99JW4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.82□□□□□ -0.68
Lims1Q99JW4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lims1Q99JW4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lims1Q99JW4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.81□□□□□ -0.68
Lims1Q99JW4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms