Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC44A1Q8WWI5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 METTL21AP1-201ENST00000438852 635 ntBASIC15.05■□□□□ -0
SLC44A1Q8WWI5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AC025678.2-201ENST00000562061 970 ntBASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AC009407.1-201ENST00000568958 598 ntBASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AC036164.1-201ENST00000570544 333 ntBASIC15.05■□□□□ -0
SLC44A1Q8WWI5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AL049840.4-201ENST00000602422 811 ntBASIC15.05■□□□□ -0
SLC44A1Q8WWI5 SRD5A3P1-201ENST00000603021 949 ntBASIC15.05■□□□□ -0
SLC44A1Q8WWI5 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC44A1Q8WWI5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 RN7SL832P-201ENST00000607781 1756 ntBASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 TCAM1P-207ENST00000485295 1537 ntBASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 TMEM198B-204ENST00000484016 896 ntBASIC15.04■□□□□ -0
SLC44A1Q8WWI5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AC027796.2-201ENST00000575326 344 ntBASIC15.04■□□□□ -0
SLC44A1Q8WWI5 AC092364.2-202ENST00000597012 1073 ntBASIC15.04■□□□□ -0
SLC44A1Q8WWI5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms