Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Snord83b-201ENSMUST00000104546 94 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm16177-201ENSMUST00000120728 718 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm17150-201ENSMUST00000165577 381 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm7029-201ENSMUST00000173226 450 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm10268-201ENSMUST00000085340 555 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.55□□□□□ -0.72
Rab42Q0PD08 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rab42Q0PD08 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.54□□□□□ -0.72
Rab42Q0PD08 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.54□□□□□ -0.72
Rab42Q0PD08 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm12390-201ENSMUST00000117897 397 ntBASIC10.54□□□□□ -0.72
Rab42Q0PD08 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm12363-201ENSMUST00000122250 668 ntBASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm8602-201ENSMUST00000184045 607 ntBASIC10.54□□□□□ -0.72
Rab42Q0PD08 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.54□□□□□ -0.72
Rab42Q0PD08 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.54□□□□□ -0.72
Rab42Q0PD08 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rab42Q0PD08 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.53□□□□□ -0.72
Rab42Q0PD08 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.53□□□□□ -0.72
Rab42Q0PD08 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Gm1335-201ENSMUST00000121653 386 ntBASIC10.53□□□□□ -0.72
Rab42Q0PD08 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.53□□□□□ -0.72
Rab42Q0PD08 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rab42Q0PD08 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms