Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ercc3P49135 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ercc3P49135 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ercc3P49135 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.12□□□□□ -0.15
Ercc3P49135 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.12□□□□□ -0.15
Ercc3P49135 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ercc3P49135 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Ercc3P49135 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.12□□□□□ -0.15
Ercc3P49135 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Mir5132-201ENSMUST00000175166 71 ntBASIC14.12□□□□□ -0.15
Ercc3P49135 Gm28686-201ENSMUST00000187404 609 ntBASIC14.12□□□□□ -0.15
Ercc3P49135 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.12□□□□□ -0.15
Ercc3P49135 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.12□□□□□ -0.15
Ercc3P49135 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.12□□□□□ -0.15
Ercc3P49135 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ercc3P49135 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.12□□□□□ -0.15
Ercc3P49135 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC14.12□□□□□ -0.15
Ercc3P49135 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ercc3P49135 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ercc3P49135 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ercc3P49135 Gm7857-201ENSMUST00000117957 358 ntBASIC14.11□□□□□ -0.15
Ercc3P49135 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.11□□□□□ -0.15
Ercc3P49135 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Ercc3P49135 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.11□□□□□ -0.15
Ercc3P49135 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.11□□□□□ -0.15
Ercc3P49135 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.11□□□□□ -0.15
Ercc3P49135 Gm9797-202ENSMUST00000218003 294 ntBASIC14.11□□□□□ -0.15
Ercc3P49135 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.11□□□□□ -0.15
Ercc3P49135 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ercc3P49135 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ercc3P49135 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.11□□□□□ -0.15
Ercc3P49135 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.11□□□□□ -0.15
Ercc3P49135 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ercc3P49135 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.11□□□□□ -0.15
Ercc3P49135 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Gm26286-201ENSMUST00000104166 134 ntBASIC14.1□□□□□ -0.15
Ercc3P49135 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ercc3P49135 Gm15610-201ENSMUST00000120584 195 ntBASIC14.1□□□□□ -0.15
Ercc3P49135 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ercc3P49135 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.1□□□□□ -0.15
Ercc3P49135 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.1□□□□□ -0.15
Ercc3P49135 Gm42599-201ENSMUST00000201308 469 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms