Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm13453-201ENSMUST00000118708 357 ntBASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm11700-201ENSMUST00000119409 403 ntBASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm27331-201ENSMUST00000183705 60 ntBASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm9797-201ENSMUST00000052902 613 ntBASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm11637-201ENSMUST00000120601 592 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm11597-201ENSMUST00000121423 964 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm26185-201ENSMUST00000157692 266 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm5354-201ENSMUST00000182417 973 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm27618-201ENSMUST00000183671 60 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm6439-201ENSMUST00000199849 862 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm9063-201ENSMUST00000223299 582 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.68□□□□□ -0.7
Ccnb1ip1D3Z3K2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccnb1ip1D3Z3K2 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccnb1ip1D3Z3K2 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccnb1ip1D3Z3K2 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Ccnb1ip1D3Z3K2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms