Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC091951.1-201ENST00000512854 2465 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 FAM45BP-202ENST00000592932 1624 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 ACKR1-201ENST00000368121 1240 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 KLF2P2-201ENST00000416807 1039 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 GHSR-202ENST00000427970 912 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 KRT43P-201ENST00000434019 910 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AC234783.1-201ENST00000441761 496 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AL022328.1-201ENST00000610050 478 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 REXO1L5P-201ENST00000622260 2098 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AL157414.3-201ENST00000624276 1954 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 KRT8P35-201ENST00000483942 1338 ntBASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 WASH3P-207ENST00000560956 1394 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 LRRC59-203ENST00000576448 1531 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 BCYRN1-201ENST00000418539 200 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 NUS1P3-201ENST00000423502 862 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 KRT223P-202ENST00000449164 1292 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 AC022137.2-201ENST00000503482 481 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 GPR182-203ENST00000622922 591 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 AL137784.3-201ENST00000623858 2288 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms