Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm5419-201ENSMUST00000119301 527 ntBASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ubqln1Q8R317 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm11511-201ENSMUST00000118146 540 ntBASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm12164-201ENSMUST00000121695 551 ntBASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm16570-201ENSMUST00000161951 436 ntBASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm44967-201ENSMUST00000207047 631 ntBASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Map1b-203ENSMUST00000223725 2669 ntBASIC11.31□□□□□ -0.6
Ubqln1Q8R317 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubqln1Q8R317 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ubqln1Q8R317 Gm17376-201ENSMUST00000166016 84 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms