Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Treml1Q8K558 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Treml1Q8K558 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Treml1Q8K558 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Treml1Q8K558 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.72□□□□□ -0.53
Treml1Q8K558 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Treml1Q8K558 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Treml1Q8K558 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Treml1Q8K558 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Treml1Q8K558 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Treml1Q8K558 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.71□□□□□ -0.53
Treml1Q8K558 Gm15004-201ENSMUST00000119192 630 ntBASIC11.71□□□□□ -0.53
Treml1Q8K558 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.71□□□□□ -0.53
Treml1Q8K558 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Mir6927-201ENSMUST00000184494 71 ntBASIC11.71□□□□□ -0.53
Treml1Q8K558 Gm8956-201ENSMUST00000203939 825 ntBASIC11.71□□□□□ -0.53
Treml1Q8K558 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.71□□□□□ -0.53
Treml1Q8K558 Gm9797-202ENSMUST00000218003 294 ntBASIC11.71□□□□□ -0.53
Treml1Q8K558 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.71□□□□□ -0.53
Treml1Q8K558 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.53
Treml1Q8K558 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Treml1Q8K558 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Treml1Q8K558 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml1Q8K558 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml1Q8K558 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml1Q8K558 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Treml1Q8K558 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Treml1Q8K558 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.71□□□□□ -0.54
Treml1Q8K558 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.71□□□□□ -0.54
Treml1Q8K558 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Treml1Q8K558 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Treml1Q8K558 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm26286-201ENSMUST00000104166 134 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Treml1Q8K558 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Treml1Q8K558 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Treml1Q8K558 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Treml1Q8K558 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Treml1Q8K558 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Treml1Q8K558 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.7□□□□□ -0.54
Treml1Q8K558 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms