Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.99□□□□□ -0.81
Tsen54Q8C2A2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm11637-201ENSMUST00000120601 592 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm16177-201ENSMUST00000120728 718 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm28693-202ENSMUST00000190758 331 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Tsen54Q8C2A2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm14660-201ENSMUST00000119809 575 ntBASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tsen54Q8C2A2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms