Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atg4dQ8BGV9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Atg4dQ8BGV9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atg4dQ8BGV9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atg4dQ8BGV9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Atg4dQ8BGV9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm5714-201ENSMUST00000197343 566 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Rps4l-202ENSMUST00000204242 789 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm45575-201ENSMUST00000210283 548 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm5369-201ENSMUST00000217499 588 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm6867-201ENSMUST00000219165 425 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm25007-201ENSMUST00000083808 133 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atg4dQ8BGV9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Gm24891-201ENSMUST00000104391 136 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Gm5982-201ENSMUST00000196234 512 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Gm7940-201ENSMUST00000218195 769 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Atg4dQ8BGV9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms