Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Gm16372-201ENSMUST00000073088 450 ntBASIC9.75□□□□□ -0.85
Trim63Q38HM4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Gm10819-201ENSMUST00000099988 561 ntBASIC9.75□□□□□ -0.85
Trim63Q38HM4 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trim63Q38HM4 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim63Q38HM4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.74□□□□□ -0.85
Trim63Q38HM4 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.74□□□□□ -0.85
Trim63Q38HM4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.74□□□□□ -0.85
Trim63Q38HM4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.74□□□□□ -0.85
Trim63Q38HM4 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.74□□□□□ -0.85
Trim63Q38HM4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.74□□□□□ -0.85
Trim63Q38HM4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim63Q38HM4 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.73□□□□□ -0.85
Trim63Q38HM4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.73□□□□□ -0.85
Trim63Q38HM4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms