Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tpm1P58771 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Tpm1P58771 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.27□□□□□ -0.29
Tpm1P58771 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tpm1P58771 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tpm1P58771 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.26□□□□□ -0.29
Tpm1P58771 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Tpm1P58771 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.26□□□□□ -0.29
Tpm1P58771 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Tpm1P58771 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.26□□□□□ -0.29
Tpm1P58771 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.26□□□□□ -0.29
Tpm1P58771 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.26□□□□□ -0.29
Tpm1P58771 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.26□□□□□ -0.29
Tpm1P58771 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tpm1P58771 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tpm1P58771 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tpm1P58771 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tpm1P58771 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.25□□□□□ -0.29
Tpm1P58771 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Tpm1P58771 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.25□□□□□ -0.29
Tpm1P58771 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.25□□□□□ -0.29
Tpm1P58771 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Gm27839-201ENSMUST00000184242 106 ntBASIC13.25□□□□□ -0.29
Tpm1P58771 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tpm1P58771 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.25□□□□□ -0.29
Tpm1P58771 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tpm1P58771 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms