Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.19□□□□□ -0.3
RarbP22605 Gm24398-201ENSMUST00000157870 109 ntBASIC13.19□□□□□ -0.3
RarbP22605 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RarbP22605 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.19□□□□□ -0.3
RarbP22605 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.19□□□□□ -0.3
RarbP22605 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RarbP22605 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RarbP22605 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.19□□□□□ -0.3
RarbP22605 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RarbP22605 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
RarbP22605 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RarbP22605 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.18□□□□□ -0.3
RarbP22605 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
RarbP22605 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.18□□□□□ -0.3
RarbP22605 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Gm14942-201ENSMUST00000119642 336 ntBASIC13.18□□□□□ -0.3
RarbP22605 Gm14219-201ENSMUST00000120414 288 ntBASIC13.18□□□□□ -0.3
RarbP22605 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.18□□□□□ -0.3
RarbP22605 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.18□□□□□ -0.3
RarbP22605 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.18□□□□□ -0.3
RarbP22605 Gm3150-201ENSMUST00000166418 204 ntBASIC13.18□□□□□ -0.3
RarbP22605 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Gm18367-201ENSMUST00000176139 600 ntBASIC13.18□□□□□ -0.3
RarbP22605 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RarbP22605 Gm37458-201ENSMUST00000194055 410 ntBASIC13.18□□□□□ -0.3
RarbP22605 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.18□□□□□ -0.3
RarbP22605 Gm6108-201ENSMUST00000208365 367 ntBASIC13.18□□□□□ -0.3
RarbP22605 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.18□□□□□ -0.3
RarbP22605 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RarbP22605 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RarbP22605 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RarbP22605 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.18□□□□□ -0.3
RarbP22605 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.18□□□□□ -0.3
RarbP22605 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.18□□□□□ -0.3
RarbP22605 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RarbP22605 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.18□□□□□ -0.3
RarbP22605 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.17□□□□□ -0.3
RarbP22605 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RarbP22605 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RarbP22605 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RarbP22605 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Gm13600-201ENSMUST00000117949 744 ntBASIC13.17□□□□□ -0.3
RarbP22605 Gm16166-201ENSMUST00000118291 787 ntBASIC13.17□□□□□ -0.3
RarbP22605 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.17□□□□□ -0.3
RarbP22605 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.17□□□□□ -0.3
RarbP22605 Gm8531-201ENSMUST00000188319 893 ntBASIC13.17□□□□□ -0.3
RarbP22605 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.17□□□□□ -0.3
RarbP22605 Gm45594-201ENSMUST00000211717 241 ntBASIC13.17□□□□□ -0.3
RarbP22605 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.17□□□□□ -0.3
RarbP22605 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.17□□□□□ -0.3
RarbP22605 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RarbP22605 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RarbP22605 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms