Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.25□□□□□ -0.61
TP20293 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.25□□□□□ -0.61
TP20293 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.25□□□□□ -0.61
TP20293 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.25□□□□□ -0.61
TP20293 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TP20293 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.25□□□□□ -0.61
TP20293 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.25□□□□□ -0.61
TP20293 Gm6963-201ENSMUST00000147879 379 ntBASIC11.25□□□□□ -0.61
TP20293 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Gm27390-201ENSMUST00000184516 176 ntBASIC11.25□□□□□ -0.61
TP20293 Gm9230-201ENSMUST00000188228 532 ntBASIC11.25□□□□□ -0.61
TP20293 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.25□□□□□ -0.61
TP20293 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.25□□□□□ -0.61
TP20293 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.25□□□□□ -0.61
TP20293 Gm19187-201ENSMUST00000206781 892 ntBASIC11.25□□□□□ -0.61
TP20293 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.25□□□□□ -0.61
TP20293 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.25□□□□□ -0.61
TP20293 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TP20293 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TP20293 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.24□□□□□ -0.61
TP20293 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.24□□□□□ -0.61
TP20293 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TP20293 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TP20293 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.24□□□□□ -0.61
TP20293 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.24□□□□□ -0.61
TP20293 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.24□□□□□ -0.61
TP20293 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.24□□□□□ -0.61
TP20293 Gm15276-201ENSMUST00000145953 498 ntBASIC11.24□□□□□ -0.61
TP20293 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.24□□□□□ -0.61
TP20293 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 AA914427-201ENSMUST00000193194 1166 ntBASIC11.24□□□□□ -0.61
TP20293 Gm38317-201ENSMUST00000195564 343 ntBASIC11.24□□□□□ -0.61
TP20293 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.24□□□□□ -0.61
TP20293 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.24□□□□□ -0.61
TP20293 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.24□□□□□ -0.61
TP20293 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TP20293 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.24□□□□□ -0.61
TP20293 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.24□□□□□ -0.61
TP20293 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TP20293 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TP20293 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
TP20293 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TP20293 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TP20293 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms