Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
PdgfrbP05622 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
PdgfrbP05622 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PdgfrbP05622 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
PdgfrbP05622 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
PdgfrbP05622 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Gm25668-201ENSMUST00000157700 129 ntBASIC12.08□□□□□ -0.48
PdgfrbP05622 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.08□□□□□ -0.48
PdgfrbP05622 CT009495.1-201ENSMUST00000224221 862 ntBASIC12.08□□□□□ -0.48
PdgfrbP05622 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Gm5455-201ENSMUST00000058710 715 ntBASIC12.08□□□□□ -0.48
PdgfrbP05622 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.08□□□□□ -0.48
PdgfrbP05622 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
PdgfrbP05622 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdgfrbP05622 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.07□□□□□ -0.48
PdgfrbP05622 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PdgfrbP05622 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.07□□□□□ -0.48
PdgfrbP05622 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Gm43962-201ENSMUST00000203898 190 ntBASIC12.07□□□□□ -0.48
PdgfrbP05622 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.07□□□□□ -0.48
PdgfrbP05622 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdgfrbP05622 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PdgfrbP05622 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms