Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 AC092337.1-201ENST00000568699 1129 ntBASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 AL359881.2-201ENST00000602973 570 ntBASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX49Q9Y6V7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 AC074044.1-201ENST00000609673 707 ntBASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 RPSAP52-203ENST00000622976 1023 ntBASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX49Q9Y6V7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 AC097359.2-201ENST00000604992 2389 ntBASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 KRT18P64-201ENST00000434946 1219 ntBASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 ACA64.2-201ENST00000459014 129 ntBASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 MIR4259-201ENST00000584466 101 ntBASIC18.18■□□□□ 0.5
DDX49Q9Y6V7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms