Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 AC016700.1-201ENST00000429424 312 ntBASIC16.16■□□□□ 0.18
NXF3Q9H4D5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 AC100827.2-201ENST00000563214 1194 ntBASIC16.16■□□□□ 0.18
NXF3Q9H4D5 DUX4L46-201ENST00000566845 751 ntBASIC16.16■□□□□ 0.18
NXF3Q9H4D5 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NXF3Q9H4D5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AC131206.1-201ENST00000538078 1211 ntBASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AC138649.2-201ENST00000615886 705 ntBASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AL023803.2-201ENST00000620080 638 ntBASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 CICP23-201ENST00000605013 2741 ntBASIC16.15■□□□□ 0.18
NXF3Q9H4D5 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 AC007292.2-201ENST00000593524 1812 ntBASIC16.15■□□□□ 0.18
NXF3Q9H4D5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NXF3Q9H4D5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
NXF3Q9H4D5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.14■□□□□ 0.18
NXF3Q9H4D5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.14■□□□□ 0.18
NXF3Q9H4D5 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NXF3Q9H4D5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.14■□□□□ 0.18
NXF3Q9H4D5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 LINC00528-201ENST00000600723 2160 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AGAP7P-201ENST00000582299 2062 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AGAP14-201ENST00000624701 2060 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AC005077.2-201ENST00000449786 690 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 EIF4HP1-201ENST00000453115 687 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 GCOM2-201ENST00000509133 1104 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NXF3Q9H4D5 AC132192.2-201ENST00000596206 1147 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 BNIP3P13-201ENST00000599968 566 ntBASIC16.14■□□□□ 0.17
NXF3Q9H4D5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms