Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.55□□□□□ -0.4
Cntn3Q07409 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Cntn3Q07409 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cntn3Q07409 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm13035-201ENSMUST00000117496 342 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm12501-201ENSMUST00000119163 529 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm25881-201ENSMUST00000157783 103 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm20426-201ENSMUST00000173657 440 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cntn3Q07409 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm8956-201ENSMUST00000203939 825 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm807-202ENSMUST00000224929 408 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cntn3Q07409 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.54□□□□□ -0.4
Cntn3Q07409 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cntn3Q07409 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm14058-201ENSMUST00000116082 735 ntBASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm6754-201ENSMUST00000117124 913 ntBASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm3332-201ENSMUST00000189337 928 ntBASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm42997-202ENSMUST00000200321 985 ntBASIC12.53□□□□□ -0.4
Cntn3Q07409 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Spcs1-203ENSMUST00000226374 592 ntBASIC12.53□□□□□ -0.4
Cntn3Q07409 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cntn3Q07409 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cntn3Q07409 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cntn3Q07409 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cntn3Q07409 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms