Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Rab4aP56371 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC9.42□□□□□ -0.9
Rab4aP56371 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Rab4aP56371 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.42□□□□□ -0.9
Rab4aP56371 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.42□□□□□ -0.9
Rab4aP56371 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.42□□□□□ -0.9
Rab4aP56371 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rab4aP56371 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Rab4aP56371 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Rab4aP56371 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rab4aP56371 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rab4aP56371 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rab4aP56371 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Rab4aP56371 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Rab4aP56371 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.41□□□□□ -0.9
Rab4aP56371 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.41□□□□□ -0.9
Rab4aP56371 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Rab4aP56371 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm15467-201ENSMUST00000120582 445 ntBASIC9.41□□□□□ -0.9
Rab4aP56371 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm3436-201ENSMUST00000179930 840 ntBASIC9.41□□□□□ -0.9
Rab4aP56371 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.41□□□□□ -0.9
Rab4aP56371 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.41□□□□□ -0.9
Rab4aP56371 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.41□□□□□ -0.9
Rab4aP56371 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Rab4aP56371 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Rab4aP56371 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Rab4aP56371 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.41□□□□□ -0.9
Rab4aP56371 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Rab4aP56371 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms