Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gm44967-201ENSMUST00000207047 631 ntBASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm22133-201ENSMUST00000102082 109 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm13665-201ENSMUST00000120830 528 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm11660-201ENSMUST00000120955 412 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm5616-201ENSMUST00000165252 384 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm8741-201ENSMUST00000174736 384 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Gm5705-201ENSMUST00000066241 711 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igh-VJ558P01758 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.3□□□□□ -0.76
Igh-VJ558P01758 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Mir1938-201ENSMUST00000158746 100 ntBASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm25890-201ENSMUST00000177643 165 ntBASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm22614-201ENSMUST00000178300 165 ntBASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm22042-201ENSMUST00000082989 165 ntBASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gm26110-201ENSMUST00000083971 165 ntBASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms