Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdc40Q9DC48 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.16□□□□□ -0.62
Cdc40Q9DC48 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdc40Q9DC48 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdc40Q9DC48 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdc40Q9DC48 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdc40Q9DC48 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm13996-201ENSMUST00000118456 430 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm12566-201ENSMUST00000121479 359 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm6963-201ENSMUST00000147879 379 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Mir5120-201ENSMUST00000175020 78 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm32999-201ENSMUST00000192693 562 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gm17812-201ENSMUST00000204935 318 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdc40Q9DC48 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdc40Q9DC48 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Gm42937-201ENSMUST00000197360 752 ntBASIC11.14□□□□□ -0.63
Cdc40Q9DC48 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Gm18730-201ENSMUST00000218038 343 ntBASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdc40Q9DC48 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms