Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm807-202ENSMUST00000224929 408 ntBASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc9Q8VC31 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm9035-201ENSMUST00000218318 1697 ntBASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm15487-201ENSMUST00000122373 465 ntBASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm20445-201ENSMUST00000061905 565 ntBASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc9Q8VC31 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Gm14057-201ENSMUST00000120631 482 ntBASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Gm12151-201ENSMUST00000121374 290 ntBASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc9Q8VC31 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms