Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sfr1Q8BP27 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sfr1Q8BP27 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sfr1Q8BP27 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Gm25700-201ENSMUST00000177693 110 ntBASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sfr1Q8BP27 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm38241-201ENSMUST00000192641 898 ntBASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sfr1Q8BP27 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Gm15808-201ENSMUST00000119046 604 ntBASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.25□□□□□ -0.45
Sfr1Q8BP27 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms