Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-3P97334 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm15615-201ENSMUST00000118876 198 ntBASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.96□□□□□ -0.01
Nkx2-3P97334 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm19091-201ENSMUST00000208120 978 ntBASIC14.96□□□□□ -0.01
Nkx2-3P97334 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm30671-201ENSMUST00000214898 318 ntBASIC14.96□□□□□ -0.01
Nkx2-3P97334 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm9139-201ENSMUST00000218817 700 ntBASIC14.96□□□□□ -0.01
Nkx2-3P97334 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.96□□□□□ -0.01
Nkx2-3P97334 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.96□□□□□ -0.01
Nkx2-3P97334 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-3P97334 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx2-3P97334 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.95□□□□□ -0.02
Nkx2-3P97334 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Gm12628-201ENSMUST00000122193 382 ntBASIC14.95□□□□□ -0.02
Nkx2-3P97334 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Gm43852-201ENSMUST00000202098 917 ntBASIC14.95□□□□□ -0.02
Nkx2-3P97334 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14.95□□□□□ -0.02
Nkx2-3P97334 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.95□□□□□ -0.02
Nkx2-3P97334 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-3P97334 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm25766-201ENSMUST00000104101 131 ntBASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.94□□□□□ -0.02
Nkx2-3P97334 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm16380-201ENSMUST00000077997 478 ntBASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.94□□□□□ -0.02
Nkx2-3P97334 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms