Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Atxn1P54254 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Atxn1P54254 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.93□□□□□ -0.5
Atxn1P54254 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Atxn1P54254 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.93□□□□□ -0.5
Atxn1P54254 Gm14219-201ENSMUST00000120414 288 ntBASIC11.93□□□□□ -0.5
Atxn1P54254 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.93□□□□□ -0.5
Atxn1P54254 Gm4862-201ENSMUST00000170405 438 ntBASIC11.93□□□□□ -0.5
Atxn1P54254 Gm28388-201ENSMUST00000186262 437 ntBASIC11.93□□□□□ -0.5
Atxn1P54254 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.93□□□□□ -0.5
Atxn1P54254 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.93□□□□□ -0.5
Atxn1P54254 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.93□□□□□ -0.5
Atxn1P54254 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Atxn1P54254 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Atxn1P54254 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Atxn1P54254 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.93□□□□□ -0.5
Atxn1P54254 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.93□□□□□ -0.5
Atxn1P54254 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atxn1P54254 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Atxn1P54254 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Atxn1P54254 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.92□□□□□ -0.5
Atxn1P54254 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.92□□□□□ -0.5
Atxn1P54254 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm43184-201ENSMUST00000197247 542 ntBASIC11.92□□□□□ -0.5
Atxn1P54254 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm45856-201ENSMUST00000212752 416 ntBASIC11.92□□□□□ -0.5
Atxn1P54254 Gm6722-201ENSMUST00000221586 390 ntBASIC11.92□□□□□ -0.5
Atxn1P54254 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm9996-201ENSMUST00000070359 913 ntBASIC11.92□□□□□ -0.5
Atxn1P54254 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Atxn1P54254 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Atxn1P54254 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.92□□□□□ -0.5
Atxn1P54254 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.92□□□□□ -0.5
Atxn1P54254 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.92□□□□□ -0.5
Atxn1P54254 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Atxn1P54254 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Atxn1P54254 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.91□□□□□ -0.5
Atxn1P54254 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Atxn1P54254 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
Atxn1P54254 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms