Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm3926-201ENSMUST00000223378 1123 ntBASIC17.55■□□□□ 0.4
Chd1P40201 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chd1P40201 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Chd1P40201 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Gm42498-201ENSMUST00000199981 1372 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chd1P40201 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Chd1P40201 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd1P40201 AC122891.1-201ENSMUST00000218671 268 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd1P40201 Gm17836-201ENSMUST00000191976 1302 ntBASIC17.55■□□□□ 0.4
Chd1P40201 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1P40201 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Chd1P40201 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.54■□□□□ 0.4
Chd1P40201 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC17.54■□□□□ 0.4
Chd1P40201 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC17.54■□□□□ 0.4
Chd1P40201 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC17.54■□□□□ 0.4
Chd1P40201 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC17.54■□□□□ 0.4
Chd1P40201 Ighv1-60-201ENSMUST00000195816 405 ntBASIC17.54■□□□□ 0.4
Chd1P40201 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC17.54■□□□□ 0.4
Chd1P40201 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC17.54■□□□□ 0.4
Chd1P40201 Gm18065-201ENSMUST00000221395 526 ntBASIC17.54■□□□□ 0.4
Chd1P40201 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Gm6560-201ENSMUST00000198588 1591 ntBASIC17.54■□□□□ 0.4
Chd1P40201 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Chd1P40201 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1P40201 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd1P40201 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Chd1P40201 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chd1P40201 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Gm4705-201ENSMUST00000177415 354 ntBASIC17.53■□□□□ 0.4
Chd1P40201 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chd1P40201 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC17.53■□□□□ 0.4
Chd1P40201 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Chd1P40201 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC17.53■□□□□ 0.4
Chd1P40201 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.53■□□□□ 0.4
Chd1P40201 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.53■□□□□ 0.4
Chd1P40201 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Chd1P40201 Gm37160-201ENSMUST00000193081 1689 ntBASIC17.53■□□□□ 0.4
Chd1P40201 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1P40201 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC17.52■□□□□ 0.4
Chd1P40201 Gm15626-201ENSMUST00000117478 868 ntBASIC17.52■□□□□ 0.4
Chd1P40201 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1P40201 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1P40201 Gm23582-201ENSMUST00000158530 139 ntBASIC17.52■□□□□ 0.4
Chd1P40201 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1P40201 Gm44498-201ENSMUST00000199509 111 ntBASIC17.52■□□□□ 0.4
Chd1P40201 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC17.52■□□□□ 0.4
Chd1P40201 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Chd1P40201 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1P40201 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1P40201 Gm5159-201ENSMUST00000212733 1652 ntBASIC17.52■□□□□ 0.4
Chd1P40201 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC17.52■□□□□ 0.4
Chd1P40201 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1P40201 Gm7104-201ENSMUST00000179741 2532 ntBASIC17.52■□□□□ 0.4
Chd1P40201 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Chd1P40201 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1P40201 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1P40201 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms