Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gm15131-201ENSMUST00000119124 595 ntBASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcb1Q9Z0H3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm14193-201ENSMUST00000105067 153 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm15566-201ENSMUST00000121130 590 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm8737-201ENSMUST00000122208 642 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm9540-201ENSMUST00000188230 478 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm10179-201ENSMUST00000086233 688 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smarcb1Q9Z0H3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smarcb1Q9Z0H3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms