Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 HNRNPA1P63-201ENST00000427917 963 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC006033.1-201ENST00000440505 426 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 HSPB1P2-201ENST00000448722 546 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC005077.2-201ENST00000449786 690 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 PFN1P12-201ENST00000455938 534 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC098799.1-201ENST00000504752 800 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC022616.1-201ENST00000518688 554 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 EEF1DP1-201ENST00000585891 896 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC026790.2-201ENST00000606282 430 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AL022328.3-201ENST00000607943 679 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC138466.3-201ENST00000619983 221 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AL139099.5-201ENST00000635274 300 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ZBTB45P1-201ENST00000452761 1456 ntBASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRTAP4-3Q9BYR4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRTAP4-3Q9BYR4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRTAP4-3Q9BYR4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC5.11□□□□□ -1.59
KRTAP4-3Q9BYR4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRTAP4-3Q9BYR4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms