Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Map1b-203ENSMUST00000223725 2669 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Gm12501-201ENSMUST00000119163 529 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Gm2553-201ENSMUST00000215986 605 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lrrtm4Q80XG9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gm12857-201ENSMUST00000117678 592 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Mir5120-201ENSMUST00000175020 78 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gm28686-201ENSMUST00000187404 609 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gm18827-201ENSMUST00000188341 790 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lrrtm4Q80XG9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lrrtm4Q80XG9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms